Re-run this search with the SEG filter switched off
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= CPAR2_601810
(417 letters)
Database: Seq/AA.fsa
85,676 sequences; 40,655,052 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
CPAR2_601810 Chr6 (429342..430595) [1254 bp, 417 aa] Putative de... 866 0.0 CORT0F02800 c6 (573831..575081) [1251 bp, 416 aa] putative debra... 695 0.0 CD36_62180 Chr6 (433057..434496) [1440 bp, 479 aa] Similar to S... 473 e-165 orf19.3506 Chr6 (419093..420490) [1398 bp, 465 aa] Debranchase; ... 472 e-164 CAWG_05162 c7 complement(623041..624435) [1395 bp, 464 aa] 472 e-164 CTRG_02902 c3 (1933732..1935117) [1386 bp, 461 aa] 459 e-160 SPAPADRAFT_143265 c7 (431701..432536,432657..433155) [1335 bp, 4... 439 e-152 PICST_45555 Chr4 (449915..451345) [1431 bp, 476 aa] predicted pr... 396 e-134 LELG_04813 c7 complement(545212..546816) [1605 bp, 534 aa] 367 e-122 PGUG_05494 c7 complement(586042..587220) [1179 bp, 392 aa] 359 e-121 CANTEDRAFT_104725 c15 (330888..332108) [1221 bp, 406 aa] 352 e-118 DEHA2E08250g Chr5 (649567..651108) [1542 bp, 513 aa] weakly simi... 317 e-103 CLUG_03342 c4 complement(308964..310451) [1488 bp, 495 aa] 293 4e-94 YKL149C Chr11 complement(167617..168834) [1218 bp, 405 aa] RNA l... 253 7e-80
>CPAR2_601810 Chr6 (429342..430595) [1254 bp, 417 aa] Putative debranchase
Length = 417
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust. Identities = 417/417 (100%), Positives = 417/417 (100%)
Query: 1 MKTLKVAIEGCCHGDLNKIYKGIPSSTELLLICGDFQALRNTSDYQALSVPEKYRRLGDF 60
MKTLKVAIEGCCHGDLNKIYKGIPSSTELLLICGDFQALRNTSDYQALSVPEKYRRLGDF
Sbjct: 1 MKTLKVAIEGCCHGDLNKIYKGIPSSTELLLICGDFQALRNTSDYQALSVPEKYRRLGDF 60
Query: 61 QSYYTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICGWS 120
QSYYTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICGWS
Sbjct: 61 QSYYTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICGWS 120
Query: 121 GIYNPHTYMNKSFNVERLPFDSNSIRSVYHQKLSNFLKMYLQRDMDIVLSHDWPVGIEKF 180
GIYNPHTYMNKSFNVERLPFDSNSIRSVYHQKLSNFLKMYLQRDMDIVLSHDWPVGIEKF
Sbjct: 121 GIYNPHTYMNKSFNVERLPFDSNSIRSVYHQKLSNFLKMYLQRDMDIVLSHDWPVGIEKF 180
Query: 181 GDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANVNHNISKPK 240
GDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANVNHNISKPK
Sbjct: 181 GDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANVNHNISKPK 240
Query: 241 QVKNANEILLDMESLDEASDGENQPQKKMKPNGHVVHDTQFLALDKYGPRRSYFEVINIP 300
QVKNANEILLDMESLDEASDGENQPQKKMKPNGHVVHDTQFLALDKYGPRRSYFEVINIP
Sbjct: 241 QVKNANEILLDMESLDEASDGENQPQKKMKPNGHVVHDTQFLALDKYGPRRSYFEVINIP 300
Query: 301 ILENNHPSVHDDGLYYDKRAIAINRVVEKYRIDQKTEFELMSPREILRDPRKLEKFIPLV 360
ILENNHPSVHDDGLYYDKRAIAINRVVEKYRIDQKTEFELMSPREILRDPRKLEKFIPLV
Sbjct: 301 ILENNHPSVHDDGLYYDKRAIAINRVVEKYRIDQKTEFELMSPREILRDPRKLEKFIPLV 360
Query: 361 AKELEEINQIDDNQFVIPKNFEVVAPADYDGELKYYPNAQTEEYCRKFGIPQQDYQL 417
AKELEEINQIDDNQFVIPKNFEVVAPADYDGELKYYPNAQTEEYCRKFGIPQQDYQL
Sbjct: 361 AKELEEINQIDDNQFVIPKNFEVVAPADYDGELKYYPNAQTEEYCRKFGIPQQDYQL 417
>CORT0F02800 c6 (573831..575081) [1251 bp, 416 aa] putative debranchase
Length = 416
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/412 (80%), Positives = 375/412 (91%), Gaps = 1/412 (0%)
Query: 1 MKTLKVAIEGCCHGDLNKIYKGIPSSTELLLICGDFQALRNTSDYQALSVPEKYRRLGDF 60
MKTLKVAIEGCCHGDL KIYK IP+STELLLICGDFQALRNTSD+QAL+VPEKYRRLGDF
Sbjct: 1 MKTLKVAIEGCCHGDLYKIYKEIPASTELLLICGDFQALRNTSDFQALNVPEKYRRLGDF 60
Query: 61 QSYYTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICGWS 120
QSYYT K KAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLG+FGSVHYKGLS+CGWS
Sbjct: 61 QSYYTGKNKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGQFGSVHYKGLSVCGWS 120
Query: 121 GIYNPHTYMNKSFNVERLPFDSNSIRSVYHQKLSNFLKMYLQRDMDIVLSHDWPVGIEKF 180
GIY+PHTYMN+SFNVE+LP+D +SIRSVYHQKL FLKMYL+RD+DIVLSHDWPVGIE++
Sbjct: 121 GIYSPHTYMNRSFNVEKLPYDPSSIRSVYHQKLPIFLKMYLKRDVDIVLSHDWPVGIEQY 180
Query: 181 GDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANVNHNISKPK 240
G+K +LLKQKP+FTQDIKKGQLGSPLN VLLHHLKPRYWFSGHLHVKF+ANVNHN ++ K
Sbjct: 181 GNKQKLLKQKPYFTQDIKKGQLGSPLNKVLLHHLKPRYWFSGHLHVKFEANVNHNKTELK 240
Query: 241 QVKNANEILLDMESLDEASDGENQPQKKMKPNGHVVHDTQFLALDKYGPRRSYFEVINIP 300
V+N NEI LDM+SLD ASD E+Q QKK+KPNGHV HDT F+ALDKYGPRR YFEV ++P
Sbjct: 241 PVRNVNEISLDMDSLDGASDEEDQQQKKIKPNGHVGHDTHFIALDKYGPRRCYFEVKDVP 300
Query: 301 ILE-NNHPSVHDDGLYYDKRAIAINRVVEKYRIDQKTEFELMSPREILRDPRKLEKFIPL 359
I + NN+ S++DD LYYDK+AIAINRV+E+Y ID KTEFELMSPRE+LR+ + +KFIPL
Sbjct: 301 ISKSNNYLSLNDDALYYDKQAIAINRVIERYIIDHKTEFELMSPREVLRNQTQFDKFIPL 360
Query: 360 VAKELEEINQIDDNQFVIPKNFEVVAPADYDGELKYYPNAQTEEYCRKFGIP 411
V KELEE+NQ++D QF IP+NF VVAPADYDGELKY+PN QT+EYC KF IP
Sbjct: 361 VEKELEELNQLNDEQFKIPRNFGVVAPADYDGELKYFPNDQTKEYCHKFDIP 412
>CD36_62180 Chr6 (433057..434496) [1440 bp, 479 aa] Similar to S. cerevisiae
DBR1; In S. cerevisiae: RNA lariat debranching
enzyme,involved in intron turnover; required for
efficient Ty1 transposition
Length = 479
Score = 473 bits (1218), Expect = e-165, Method: Compositional matrix adjust. Identities = 243/455 (53%), Positives = 314/455 (69%), Gaps = 43/455 (9%)
Query: 1 MKTLKVAIEGCCHGDLNKIYKGIPS--STELLLICGDFQALRNTSDYQALSVPEKYRRLG 58
+ TLK+AIEGCCHG+LN IY IP S +LLLICGDFQ+LRN D Q+L+VP KY+R+
Sbjct: 16 LNTLKIAIEGCCHGELNTIYNSIPDIKSLDLLLICGDFQSLRNKCDLQSLNVPFKYQRMA 75
Query: 59 DFQSYYTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICG 118
DF YY+ K+KAPVLTIFIGGNHE SSYLQELKYGGWVAPNIYYLGEFGS+ YKGL I G
Sbjct: 76 DFHEYYSGKRKAPVLTIFIGGNHECSSYLQELKYGGWVAPNIYYLGEFGSIWYKGLQITG 135
Query: 119 WSGIYNPHTYMNKSFNVERLPFDSNSIRSVYHQKLSNFLKMY-LQRDMDIVLSHDWPVGI 177
WSGI+N HT++ ++E+LPFDS +IRSVYHQKLSNFLKMY + DMDIVLSHDWPVGI
Sbjct: 136 WSGIFNYHTFIANHIDMEKLPFDSTTIRSVYHQKLSNFLKMYMMNHDMDIVLSHDWPVGI 195
Query: 178 EKFGDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANV----- 232
EK+G+ RLLK KPFF DI++GQLGSPLN L+H+L+PRYWFSGHLHVKF+A +
Sbjct: 196 EKYGNLKRLLKLKPFFKDDIQRGQLGSPLNKFLIHYLRPRYWFSGHLHVKFEARIVDSVG 255
Query: 233 --NHNISKPK----QVKNANEILLDMES-------------------LDEASDGENQPQK 267
+ IS P N EI LDM+ + + +P+
Sbjct: 256 GNDEKISDPTANSITESNKEEISLDMDDEEEEEKDDDNGVGFEEKFYFKQHLNSTKRPRN 315
Query: 268 KMKPNGHVV-HDTQFLALDKYGPRRSYFEVINIPILENNHPSVHDDG-LYYDKRAIAINR 325
+ P V H T+FLALDK G RR + E+ + + +HPS + G LYY KR+IAIN+
Sbjct: 316 DLTPQRDVCEHATEFLALDKCGKRRQFLEIKTVEVNNTSHPSFINPGKLYYSKRSIAINK 375
Query: 326 VVEKYRIDQKTEFELMSPREILRDPR---KLEKFIPLVAKELEEI--NQIDDNQFVIPKN 380
VVEKY D + +F ++ ++IL +P+ + + +P++ E + + N D++ F++P+N
Sbjct: 376 VVEKYLNDNRQDFTDLNTKQILNNPQLFPLVNELMPIIENEFKSMQKNITDEDFFMVPEN 435
Query: 381 FEVVAPAD---YDGELKYYPNAQTEEYCRKFGIPQ 412
F++VAP + + +LKYYPN QT EYC KFGIP+
Sbjct: 436 FQIVAPTNDECIESKLKYYPNNQTLEYCEKFGIPK 470
>orf19.3506 Chr6 (419093..420490) [1398 bp, 465 aa] Debranchase; homozygous
mutant accumulates lariat intermediates of mRNA splicing
Length = 465
Score = 472 bits (1214), Expect = e-164, Method: Compositional matrix adjust. Identities = 242/453 (53%), Positives = 315/453 (69%), Gaps = 43/453 (9%)
Query: 3 TLKVAIEGCCHGDLNKIYKGIP--SSTELLLICGDFQALRNTSDYQALSVPEKYRRLGDF 60
TLK+AIEGCCHG+LN IY IP S +LLLICGDFQ+LRN D Q+L+VP KY+R+ DF
Sbjct: 4 TLKIAIEGCCHGELNDIYNSIPDIESLDLLLICGDFQSLRNKCDLQSLNVPLKYQRMADF 63
Query: 61 QSYYTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICGWS 120
YY+ K+KAPVLTIFIGGNHE SSYLQELKYGGWVAPNIYYLGEFGS+ YKGL I GWS
Sbjct: 64 HEYYSGKRKAPVLTIFIGGNHECSSYLQELKYGGWVAPNIYYLGEFGSIWYKGLQITGWS 123
Query: 121 GIYNPHTYMNKSFNVERLPFDSNSIRSVYHQKLSNFLKMYLQ-RDMDIVLSHDWPVGIEK 179
GI+N HT++ + +E+LPFDS +IRSVYHQKL+NFLKMY+ DMDIVLSHDWPVGIEK
Sbjct: 124 GIFNYHTFIANNIEMEKLPFDSRTIRSVYHQKLANFLKMYMMNHDMDIVLSHDWPVGIEK 183
Query: 180 FGDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANVNHNISKP 239
+G+ RLLK KPFF DI++GQLGSPLN L+H+L+PRYWFSGHLHVKF+A + +
Sbjct: 184 YGNVKRLLKLKPFFRDDIQRGQLGSPLNKFLIHYLRPRYWFSGHLHVKFEARIVDLVRST 243
Query: 240 KQVKNAN-----------EILLDM--------ESLDEASDGE-----------NQPQKKM 269
+ K+A EI LDM ++ E S E +P+ +
Sbjct: 244 DKKKSATTVDLITESNKEEISLDMDDEEEEEGGNVREVSFEEKFYFKQHLNPAKRPKNDL 303
Query: 270 KPNGHVV-HDTQFLALDKYGPRRSYFEVINIPILENNHPSVHDDG-LYYDKRAIAINRVV 327
P V H T+FLALDK G RR + ++ I + +HPS + G LYY KR+IAIN+VV
Sbjct: 304 TPERDVCEHATEFLALDKCGKRRQFLDIKTIEVHNTSHPSFINAGKLYYSKRSIAINKVV 363
Query: 328 EKYRIDQKTEFELMSPREILRDPRK---LEKFIPLVAKELEEI--NQIDDNQFVIPKNFE 382
EKY D + +F ++ ++IL +P++ + + +P++ + + + N D++ F++P+NF+
Sbjct: 364 EKYLNDNRQDFTELNTKQILSNPQQFPLVNELMPIIENDFKSMQKNITDEDFFMVPENFQ 423
Query: 383 VVAPAD---YDGELKYYPNAQTEEYCRKFGIPQ 412
+AP D + +LKYYPN QT EYC KFGIP+
Sbjct: 424 TIAPTDDEHTESKLKYYPNNQTLEYCEKFGIPK 456
>CAWG_05162 c7 complement(623041..624435) [1395 bp, 464 aa]
Length = 464
Score = 472 bits (1214), Expect = e-164, Method: Compositional matrix adjust. Identities = 242/453 (53%), Positives = 315/453 (69%), Gaps = 43/453 (9%)
Query: 3 TLKVAIEGCCHGDLNKIYKGIP--SSTELLLICGDFQALRNTSDYQALSVPEKYRRLGDF 60
TLK+AIEGCCHG+LN IY IP S +LLLICGDFQ+LRN D Q+L+VP KY+R+ DF
Sbjct: 4 TLKIAIEGCCHGELNDIYNSIPDIESLDLLLICGDFQSLRNKCDLQSLNVPLKYQRMADF 63
Query: 61 QSYYTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICGWS 120
YY+ K+KAPVLTIFIGGNHE SSYLQELKYGGWVAPNIYYLGEFGS+ YKGL I GWS
Sbjct: 64 HEYYSGKRKAPVLTIFIGGNHECSSYLQELKYGGWVAPNIYYLGEFGSIWYKGLQITGWS 123
Query: 121 GIYNPHTYMNKSFNVERLPFDSNSIRSVYHQKLSNFLKMY-LQRDMDIVLSHDWPVGIEK 179
GI+N HT++ + +E+LPFDS +IRSVYHQKL+NFLKMY + DMDIVLSHDWPVGIEK
Sbjct: 124 GIFNYHTFIANNIEMEKLPFDSRTIRSVYHQKLANFLKMYMMNHDMDIVLSHDWPVGIEK 183
Query: 180 FGDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANVNHNISKP 239
+G+ RLLK KPFF DI++GQLGSPLN L+H+L+PRYWFSGHLHVKF+A + +
Sbjct: 184 YGNLKRLLKLKPFFRDDIQRGQLGSPLNKFLIHYLRPRYWFSGHLHVKFEARIVDLVRST 243
Query: 240 KQVKNAN-----------EILLDM--------ESLDEASDGE-----------NQPQKKM 269
+ K+A EI LDM ++ E S E +P+ +
Sbjct: 244 DKKKSATTTDSITESNKEEISLDMDDEEEEEGGNVREVSFEEKFYFKQHLNPAKRPKNDL 303
Query: 270 KPNGHVV-HDTQFLALDKYGPRRSYFEVINIPILENNHPSVHDDG-LYYDKRAIAINRVV 327
P V H T+FLALDK G RR + ++ I + +HPS + G LYY KR+IAIN+VV
Sbjct: 304 TPERDVCEHATEFLALDKCGKRRQFLDIKTIEVHNTSHPSFINAGKLYYSKRSIAINKVV 363
Query: 328 EKYRIDQKTEFELMSPREILRDPRK---LEKFIPLVAKELEEI--NQIDDNQFVIPKNFE 382
EKY D + +F ++ ++IL +P++ + + +P++ + + + N D++ F++P+NF+
Sbjct: 364 EKYLNDNRQDFTELNTKQILSNPQQFPLVNELMPIIENDFKSMQKNITDEDFFMVPENFQ 423
Query: 383 VVAPAD---YDGELKYYPNAQTEEYCRKFGIPQ 412
+AP D + +LKYYPN QT EYC KFGIP+
Sbjct: 424 TIAPTDDEHTESKLKYYPNNQTLEYCEKFGIPK 456
>CTRG_02902 c3 (1933732..1935117) [1386 bp, 461 aa]
Length = 461
Score = 459 bits (1181), Expect = e-160, Method: Compositional matrix adjust. Identities = 234/458 (51%), Positives = 312/458 (68%), Gaps = 48/458 (10%)
Query: 1 MKTLKVAIEGCCHGDLNKIYKGIPS--STELLLICGDFQALRNTSDYQALSVPEKYRRLG 58
M+ +K+AIEGCCHG+LNKIY+ + LLLICGDFQ++RN SD Q++SVPEKY+R+
Sbjct: 1 MQLIKIAIEGCCHGELNKIYQRLSDIPDISLLLICGDFQSIRNESDLQSISVPEKYKRMA 60
Query: 59 DFQSYYTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICG 118
DF YY ++KAP+LTIFIGGNHE SSYLQELKYGGWVAPNIYYLGEFGS+ Y G+ I G
Sbjct: 61 DFHEYYKGERKAPILTIFIGGNHECSSYLQELKYGGWVAPNIYYLGEFGSLWYNGIQITG 120
Query: 119 WSGIYNPHTYMNKSFNVERLPFDSNSIRSVYHQKLSNFLKMYLQ-RDMDIVLSHDWPVGI 177
WSGI+N H+++N++ +E++P+D S+RSVYH KL NFLKMY+ DMDI++SHDWPVGI
Sbjct: 121 WSGIFNYHSFVNQNIQMEKIPYDQGSLRSVYHTKLQNFLKMYMMNHDMDIIMSHDWPVGI 180
Query: 178 EKFGDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANVNHNIS 237
E++G++ +L+K KPFF +DIK+G+LGSPLN L+H+L+PR W+SGHLHVKF+A + ++
Sbjct: 181 ERYGNQSKLIKMKPFFKEDIKRGELGSPLNKFLIHYLRPRNWYSGHLHVKFEAIIKKDLG 240
Query: 238 K------------------PKQVKNANEILLDME------------SLDEA-----SDGE 262
K + VKN EI LDM+ +E S G
Sbjct: 241 KINDNELELNMDDDEEEEEEEMVKNKQEISLDMDDDDSGMDSNIQVGFEETFHFVQSGGS 300
Query: 263 NQPQK-KMKP-NGHVVHDTQFLALDKYGPRRSYFEVINIPILENNHPSVHDDGLYYDKRA 320
N+ K ++ P G HDT+FLALDK G +R++ EV + I HPS LY+ KRA
Sbjct: 301 NKKLKTELTPKRGLCEHDTKFLALDKCGNKRNFLEVQTVEITHPTHPSAGKSRLYFSKRA 360
Query: 321 IAINRVVEKYRIDQKTEFELMSPREILRDPR------KLEKFIPLVAKELEEINQIDDNQ 374
IAINRVVE Y + EF + +EILR+P +L + + L AK+L ++D +
Sbjct: 361 IAINRVVESYLQQHQEEFYKIDTKEILRNPHNFPLVNELMRLVDLEAKKLS--TSMNDEE 418
Query: 375 FVIPKNFEVVAPADYDGELKYYPNAQTEEYCRKFGIPQ 412
F++P+NFE++AP ELKYYPN QT+EYC KF IP+
Sbjct: 419 FIVPENFEIIAPVKCKDELKYYPNNQTQEYCEKFNIPK 456
>SPAPADRAFT_143265 c7 (431701..432536,432657..433155) [1335 bp, 444 aa]
Length = 444
Score = 439 bits (1129), Expect = e-152, Method: Compositional matrix adjust. Identities = 228/445 (51%), Positives = 306/445 (68%), Gaps = 34/445 (7%)
Query: 1 MKTLKVAIEGCCHGDLNKIYKGIPSSTELLLICGDFQALRNTSDYQALSVPEKYRRLGDF 60
M ++++AI+GC HG+L +IY I T+LLLI GDFQALR+T DYQAL+VP KYR LGDF
Sbjct: 1 MSSVRIAIQGCAHGELEQIYAKIDPKTDLLLILGDFQALRSTQDYQALNVPAKYRALGDF 60
Query: 61 QSYYTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICGWS 120
SYY+ AP LTIFIGGNHE+S+YLQELKYGGWVAP +YYLGEFGSV Y+G+ I GWS
Sbjct: 61 HSYYSGALTAPCLTIFIGGNHENSAYLQELKYGGWVAPRMYYLGEFGSVWYRGIQIAGWS 120
Query: 121 GIYNPHTYMNKSFNVERLPFDSNSIRSVYHQKLSNFLKMYLQ-RDMDIVLSHDWPVGIEK 179
GI+N T++ + VE+ P+ + + SVYHQKL+ F+K+Y+ D+D+V+SHDWPVGIE
Sbjct: 121 GIFNRSTFLRNNMYVEKPPYRRDELVSVYHQKLTAFIKLYMMNHDLDVVMSHDWPVGIED 180
Query: 180 FGDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANVNH--NIS 237
+GDK +LL KPFF +DI+ +LGSPLN LLHHL+PRYWFS HLHV F+A+V++ ++
Sbjct: 181 YGDKRKLLALKPFFKKDIENKELGSPLNKFLLHHLRPRYWFSAHLHVLFEASVSYKGEVN 240
Query: 238 KPKQVKNAN--EILLDMESLDEAS-----------DGEN------QPQK---KMKPNGHV 275
+Q K++N EI L+M+ E D E+ QP+K +M P+
Sbjct: 241 SKEQSKSSNNDEIALNMDDETEKEISNKDKINLDMDEEDLYLSNPQPKKTPPRMSPSD-- 298
Query: 276 VHDTQFLALDKYGPRRSYFEVINIPILE--NNHPSVHDDGLYYDKRAIAINRVVEKYRID 333
H T FLALDK G RR + I I E +HPS D+ LYY +RAIAIN+V+E Y
Sbjct: 299 -HSTNFLALDKCGKRRIHLRHITITPDEAHQSHPSYKDNKLYYSRRAIAINKVLETYLKS 357
Query: 334 QKTEFELMSPREILRDPRKL---EKFIPLVAKELEEINQIDDNQFVIPKNFEVVAPADYD 390
+ EF ++ R+IL DP L + +PLV EL +++ + D F++P++F+VVAP + D
Sbjct: 358 HEDEFRGINTRKILEDPHNLVLVNELMPLVELELRKLSGMKDELFIVPESFKVVAPTEDD 417
Query: 391 G-ELKYYPNAQTEEYCRKFGIPQQD 414
G +LK+YPN QTEEYC+KF + D
Sbjct: 418 GSQLKFYPNNQTEEYCKKFDVVSPD 442
>PICST_45555 Chr4 (449915..451345) [1431 bp, 476 aa] predicted protein
Length = 476
Score = 396 bits (1017), Expect = e-134, Method: Compositional matrix adjust. Identities = 218/469 (46%), Positives = 289/469 (61%), Gaps = 62/469 (13%)
Query: 2 KTLKVAIEGCCHGDLNKIYKGIPSSTELLLICGDFQALRNTSDYQALSVPEKYRRLGDFQ 61
K +K+A+EGCCHG+LN IY+ + S +LL+ICGDFQA+RN +D ++VP+KY R+ DF
Sbjct: 6 KKVKIAVEGCCHGELNAIYRSLDDSVDLLIICGDFQAIRNQTDLDTMNVPKKYLRMADFH 65
Query: 62 SYYTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICGWSG 121
YY+ K AP+LTIFIGGNHE SSYL ELK+GGWVAPNIYYLGE+GSV Y+G+ I GWSG
Sbjct: 66 EYYSGTKTAPILTIFIGGNHECSSYLTELKFGGWVAPNIYYLGEYGSVWYRGIQIAGWSG 125
Query: 122 IYNPHTYMNKSFNVERLPFDSNSIRSVYHQKLSNFLKMYLQ-RDMDIVLSHDWPVGIEKF 180
IYN ++++ + E LPF SIRSVYH K NFLKM L D+D+VLSHDWPVGIEK+
Sbjct: 126 IYNHWSFLDNFLDDESLPFTPRSIRSVYHTKPKNFLKMSLMNHDLDVVLSHDWPVGIEKY 185
Query: 181 GDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANV---NHNIS 237
GD LL++K +F DI+ G+LGSPLN LL +L+PRYWFSGHLH++F A V N I+
Sbjct: 186 GDAQWLLRKKQYFKNDIRDGKLGSPLNKFLLGYLRPRYWFSGHLHIRFDARVSYRNQEIT 245
Query: 238 KPKQ-----------------------VKNANEI-LLDMESLDEASDGENQ--------- 264
P KN++EI LDM+ E + +
Sbjct: 246 SPYSKEEVVKSDEIEINMDDEEEDEEPTKNSDEIGGLDMDDEIEVEESKITFEDKLCIDK 305
Query: 265 -------------PQKKMKPNGHVVHDTQFLALDKYGPRRSYFEVINIPI-LEN-NHPSV 309
P +K P + +T FLALDK P R +FEVI + + L+N HPSV
Sbjct: 306 RESAVDLKGFSLIPSRKRFPGDN--DETYFLALDKCLPHRRFFEVIEVEVKLQNLQHPSV 363
Query: 310 HDDGLYYDKRAIAINRVVEKYRIDQKTEFELMSPREILRDPRKL---EKFIPLVAKELEE 366
DGLY +R++AINRVVE + K +F+ +S +I P +L + +V EL
Sbjct: 364 KYDGLYMSRRSVAINRVVEDFVHKHKQQFKEISWAQISDSPSRLTIINELREVVLAELNS 423
Query: 367 INQIDDNQFVIPKN-FEVVAPADYDGE----LKYYPNAQTEEYCRKFGI 410
+++ DD+ F I + F++VAP + LKY+ N QT +YC KFGI
Sbjct: 424 LSRRDDSDFEIRHDSFKIVAPIESKNTEAIPLKYWENNQTVDYCAKFGI 472
>LELG_04813 c7 complement(545212..546816) [1605 bp, 534 aa]
Length = 534
Score = 367 bits (942), Expect = e-122, Method: Compositional matrix adjust. Identities = 177/291 (60%), Positives = 214/291 (73%), Gaps = 34/291 (11%)
Query: 1 MKTLKVAIEGCCHGDLNKIYKGIPSSTELLLICGDFQALRNTSDYQALSVPEKYRRLGDF 60
M LKVAIEGCCHG+LNKIY +P++T+LLLICGDFQALR +D+QAL+VP KY+RLGDF
Sbjct: 1 MAKLKVAIEGCCHGELNKIYSLLPANTDLLLICGDFQALRCPADFQALNVPVKYQRLGDF 60
Query: 61 QSYYTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICGWS 120
YYT ++ APVLTIFIGGNHE+SSYLQELKYGGWVAPNIYYLGEFG V Y GL ICGWS
Sbjct: 61 HQYYTGQRVAPVLTIFIGGNHEASSYLQELKYGGWVAPNIYYLGEFGCVKYAGLRICGWS 120
Query: 121 GIYNPHTYMNKSF-----------NVERLPFDSNSIRSVYHQKLSNFLKMYLQRD----- 164
GI+N +Y S+ + ERLPFD +RSVYHQKL F+KMYL R+
Sbjct: 121 GIWNHGSYTRSSWKNTIEELIQIEDEERLPFDGRLVRSVYHQKLKAFIKMYLMRNEKNSD 180
Query: 165 --MDIVLSHDWPVGIEKFGDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSG 222
+D+VLSHDWP+GI K+G+K+ LL++KPFF D++KG LGSPLNNVL+HHL+PRYWFS
Sbjct: 181 NCIDVVLSHDWPLGIVKYGNKHELLRKKPFFKNDLEKGWLGSPLNNVLIHHLRPRYWFSA 240
Query: 223 HLHVKFKANVNHNI----------------SKPKQVKNANEILLDMESLDE 257
HLHVKF+A + + + K VKN NEI +DM+S DE
Sbjct: 241 HLHVKFEAVIKRGLEESGGIVKKNNKLQDKEQTKTVKNVNEIEIDMDSSDE 291
Score = 119 bits (299), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 67/156 (42%), Positives = 91/156 (58%), Gaps = 18/156 (11%)
Query: 278 DTQFLALDKYGPRRSYFEVINIPILENNHPSVHDDG-----LYYDKRAIAINRVVEKYRI 332
+T F ALDK GPRR + V I + S DG L YD+RAIA+NRV+E I
Sbjct: 379 ETTFTALDKCGPRRQFLAVKEIETSFDGAGSDGKDGIATFQLQYDQRAIAVNRVIENILI 438
Query: 333 DQKT-----------EFELMSPREILRDPRKL-EKFIPLVAKELEEINQID-DNQFVIPK 379
+ ++P ++LR+P++L KF+PLV KE+ ++++D DN FVIP
Sbjct: 439 SRDEIEDEDEKEETLNLSRLNPMDVLRNPKELLSKFLPLVEKEIVALSKMDADNFFVIPA 498
Query: 380 NFEVVAPADYDGELKYYPNAQTEEYCRKFGIPQQDY 415
FE +DYDG L YYPN QT+EYC KFG+PQ +
Sbjct: 499 KFETTVSSDYDGVLTYYPNNQTKEYCAKFGLPQLQF 534
>PGUG_05494 c7 complement(586042..587220) [1179 bp, 392 aa]
Length = 392
Score = 359 bits (922), Expect = e-121, Method: Compositional matrix adjust. Identities = 193/416 (46%), Positives = 255/416 (61%), Gaps = 37/416 (8%)
Query: 4 LKVAIEGCCHGDLNKIYKGIPSSTELLLICGDFQALRNTSDYQALSVPEKYRRLGDFQSY 63
+K+A+ GCCHG L+ IY+ +P+ T+LL+ICGDFQALRN SD + +SVP KYR LGDF Y
Sbjct: 1 MKIAVVGCCHGLLDAIYRAVPAQTKLLIICGDFQALRNLSDLETISVPRKYRHLGDFHKY 60
Query: 64 YTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICGWSGIY 123
YT +K APVLT+F+GGNHE SSYL ELKYGGWVA NI+YLG+FG+V Y+G+ I G SGIY
Sbjct: 61 YTGEKTAPVLTVFVGGNHECSSYLDELKYGGWVAKNIFYLGQFGAVVYRGIRIAGISGIY 120
Query: 124 NPHTYMNKSFNVERLPFDSNSIRSVYHQKLSNFLKMYLQRDMDIVLSHDWPVGIEKFGDK 183
N ++ K+ RLP+ +++RS YH + F+K D+D+ +SHDWP+ I K+GD
Sbjct: 121 NESSF-RKNEPDPRLPYTDSTLRSAYHIRPKTFVKASFLEDIDVFISHDWPLEITKWGDV 179
Query: 184 YRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANVNHNISKPKQVK 243
LL+ KPFF DI+KGQLGSP+N +LL L PR+WFS HLHVKF+A V +
Sbjct: 180 NSLLRSKPFFRLDIEKGQLGSPVNQLLLEKLMPRHWFSAHLHVKFEALVRLG------HR 233
Query: 244 NANEILLDMESLDEASDGENQPQKKMKPNGHVVHDTQFLALDKYGPRRSYFEVINIPILE 303
N EI + ME E+S V +T+FLALDK P+R +F V+NI
Sbjct: 234 NEEEIEISMEDESESST--------------VAKETRFLALDKCMPKRKFFAVVNIKSAS 279
Query: 304 NNHPSVHDDGLYYDKRAIAINRVVEKYRIDQKTEFELMSPREIL----RDPRKLEKFIPL 359
+H LY DKRAIAIN+V+ Y + + EIL R P+ ++
Sbjct: 280 ADH------ALYLDKRAIAINKVIGNY----QPSLSKFASTEILDLEKRQPQLHQEMAHA 329
Query: 360 VAKELEEINQIDDNQFVIPK-NFEVVAPAD-YDGELKYYPNAQTEEYCRKFGIPQQ 413
+ KE +NQ + F+ F +AP LK YPN QT EY ++GI Q
Sbjct: 330 IEKEYHRLNQEPERHFLASNLKFRQLAPGGPVAPGLKSYPNNQTTEYVERYGIRSQ 385
>CANTEDRAFT_104725 c15 (330888..332108) [1221 bp, 406 aa]
Length = 406
Score = 352 bits (902), Expect = e-118, Method: Compositional matrix adjust. Identities = 196/420 (46%), Positives = 273/420 (65%), Gaps = 24/420 (5%)
Query: 1 MKTLKVAIEGCCHGDLNKIY-KGIPSSTELLLICGDFQALRNTSDYQALSVPEKYRRLGD 59
+KTLK+A++GCCHG+L+ IY K I +LL+I GDFQALRN +D A++VP KY+ LG
Sbjct: 3 IKTLKIAVQGCCHGELDLIYSKLIGKKVDLLVITGDFQALRNNTDLNAIAVPSKYKSLGH 62
Query: 60 FQSYYTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICGW 119
F YY+ +K+AP+ TIFIGGNHESSSYL ELKYGGWVAPNIYYLGEFG + YKGL I G
Sbjct: 63 FHKYYSGQKRAPIPTIFIGGNHESSSYLTELKYGGWVAPNIYYLGEFGCLWYKGLRIVGA 122
Query: 120 SGIYNPHTYMNKSFNVERLPFDSNSIRSVYHQKLSNFLKMYL---QRDMDIVLSHDWPVG 176
SGI+N ++++ LP+ +IRSVYH N+LKM L + ++DIV+SHDWP
Sbjct: 123 SGIFNYSSFLDNRIEDVPLPYTPLTIRSVYHMTPMNYLKMMLIQSELNIDIVVSHDWPQY 182
Query: 177 IEKFGDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANVNHNI 236
I G LLK+KPFF DI G+LGSPL + +HL+P YWF HLHVKF+ +V +
Sbjct: 183 IYHQGGLDGLLKKKPFFKDDINSGRLGSPLLKNVFNHLRPTYWFLSHLHVKFEVDVPGH- 241
Query: 237 SKPKQVKNANEILLDMESLDEASDGENQPQKKMKPNGHVVHDTQFLALDKYGPRRSYFEV 296
+ ++ KN +EI LDM +D+ + E T FLALDK G R + E+
Sbjct: 242 QQLQKTKNTDEIDLDM-GMDDTEEEEESSSLS----------THFLALDKCGKHRRHLEI 290
Query: 297 INIPILENNHPSVHDDGLYYDKRAIAINRVVEKYRIDQKTEFELMSPREILRDPRKLEKF 356
N+ +++ NH S D YYD+RAI IN+++ ++ + K + + P+E+L D K
Sbjct: 291 FNV-LVDKNHISFDKDDFYYDRRAIVINKLMGRFVVSDKG--KQIKPKELL-DSSYTIKV 346
Query: 357 IPLVAKEL-EEINQIDDN--QFVIPKNFEVVAPADY-DGELKYYPNAQTEEYCRKFGIPQ 412
+ ++ +E+ EE+N + N F +P NF+V+AP+ +L+++PN QTEEYC KF I +
Sbjct: 347 LRVLNQEIEEELNSLSVNPEDFKVPFNFKVIAPSGLISPDLQFWPNNQTEEYCTKFDISR 406
>DEHA2E08250g Chr5 (649567..651108) [1542 bp, 513 aa] weakly similar to
uniprot|P24309 Saccharomyces cerevisiae YKL149C DBR1 RNA
lariat debranching enzyme involved in intron turnover
Length = 513
Score = 317 bits (813), Expect = e-103, Method: Compositional matrix adjust. Identities = 155/271 (57%), Positives = 199/271 (73%), Gaps = 5/271 (1%)
Query: 2 KTLKVAIEGCCHGDLNKIYKGIPSSTELLLICGDFQALRNTSDYQALSVPEKYRRLGDFQ 61
+TL++A+EGCCHG+L+KIY+ +P +LLLICGDFQA+RN D + +SVPEKY++LGDF
Sbjct: 5 RTLRIAVEGCCHGELDKIYQALPDKLDLLLICGDFQAIRNMVDLKTMSVPEKYKKLGDFH 64
Query: 62 SYYTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICGWSG 121
YY+ K APVLTIFIGGNHESSSYL+ELKYGGWVAPNIYYLGEFG V +KGL I G SG
Sbjct: 65 DYYSGVKVAPVLTIFIGGNHESSSYLKELKYGGWVAPNIYYLGEFGCVWFKGLQIGGISG 124
Query: 122 IYNPHTYMN--KSFNV-ERLPFDSNSIRSVYHQKLSNFLKMYL--QRDMDIVLSHDWPVG 176
IYN ++ + +S N E+LP++ ++IRS+Y K N+LKMYL +DIVLSHDWP
Sbjct: 125 IYNQRSFYDSIRSDNKDEKLPYNPHTIRSIYQVKAKNYLKMYLMDHHRLDIVLSHDWPQH 184
Query: 177 IEKFGDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANVNHNI 236
IEK G+ +LLK+K FF DI G LGSPLNNVLL LKPRYWF+ HLHV+F+A V H+
Sbjct: 185 IEKKGNLGKLLKEKHFFKADINNGTLGSPLNNVLLDRLKPRYWFASHLHVRFQALVKHSA 244
Query: 237 SKPKQVKNANEILLDMESLDEASDGENQPQK 267
+ + + ++DE +D + +K
Sbjct: 245 KRSNNEVSDSVSKKSKSNIDELNDNKQNNEK 275
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 97/195 (49%), Gaps = 36/195 (18%)
Query: 244 NANEILLDMESLDEASDGENQPQKKMKPNGHVVHDTQFLALDKYGPRRSYFEVINIPILE 303
N EI L+M+ D +Q Q K+ + V +T FLALDK PRR + E++ I + +
Sbjct: 324 NTEEIKLNMDDFDLTPSTSDQLQPKV---DNEVLETHFLALDKCLPRRKFLEIMEIEVPD 380
Query: 304 NN--HPSVHDDG------------LYYDKRAIAINRVVEKY---------RIDQKTEFEL 340
N HPS D LYYDKR+IAIN+V+E + I Q +
Sbjct: 381 ENISHPSYSQDNKASLDLKTQQPLLYYDKRSIAINKVIESFIDGNLKIWNSIHQGDFYNF 440
Query: 341 MSPREILRDPRKLEKFIPLVAKELEEINQIDDNQFVI-PKNFEVVAPADYDGE---LKYY 396
+ + L + + E + EL +++ + + I P +F+V+AP +GE LKY+
Sbjct: 441 IHKQFDLHNELRDE-----IDFELNKLSNLPSDALQIDPNSFQVIAPTS-NGERIPLKYW 494
Query: 397 PNAQTEEYCRKFGIP 411
N QT EYC KF +P
Sbjct: 495 ENNQTTEYCSKFQVP 509
>CLUG_03342 c4 complement(308964..310451) [1488 bp, 495 aa]
Length = 495
Score = 293 bits (749), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 146/294 (49%), Positives = 195/294 (66%), Gaps = 25/294 (8%)
Query: 4 LKVAIEGCCHGDLNKIYKGIPSSTELLLICGDFQALRNTSDYQALSVPEKYRRLGDFQSY 63
+KV +EGCCHGDL++IY +PS ELL+ICGDF+ALRN++D + +SVP KY ++GDF Y
Sbjct: 2 VKVVVEGCCHGDLDEIYANVPSLAELLIICGDFEALRNSADLETMSVPRKYLKMGDFHRY 61
Query: 64 YTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLSICGWSGIY 123
Y+ +KKAPVLT+FIGGNHE YL+EL+YGGWVAPNIYYLG +G V +KGL I G SGI+
Sbjct: 62 YSGEKKAPVLTVFIGGNHECLLYLRELQYGGWVAPNIYYLGHYGVVWFKGLRISGISGIW 121
Query: 124 NPHTYMN----KSFNVERLPFDSNSIRSVYHQKLSNFLKMYLQRDMDIVLSHDWPVGIEK 179
N H++++ K+ LP+ +I+SVYH N+LK+ L DIV+SHDWP I K
Sbjct: 122 NYHSFISAMSKKNAPTYALPYSDQTIKSVYHVVPKNYLKLLLSLTSDIVVSHDWPQYIWK 181
Query: 180 FGDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANVNH----- 234
+G+ +LL+ KPFF +D+ G+LGSPL L LKPRYWFS HLH +F ANV H
Sbjct: 182 WGNCAQLLRHKPFFRKDMDSGRLGSPLARNALGRLKPRYWFSLHLHTRFVANVKHAEEFG 241
Query: 235 -------------NISKPKQVKNANEILLDME---SLDEASDGENQPQKKMKPN 272
+ S+ + + EI+LDM+ S D+++ E QP K N
Sbjct: 242 VDEEAYLKKKVDGDHSRETPPEKSGEIMLDMDEEVSCDKSTGSEVQPTLKEASN 295
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 61/178 (34%), Positives = 94/178 (52%), Gaps = 20/178 (11%)
Query: 229 KANVNHNISKPKQVKNANEILLDMESLDEASDGENQPQKKMKPNGHVVHDTQFLALDKYG 288
K++ N + PK ++EILLD++ A N K+ K + T FLALDK
Sbjct: 323 KSDTNPGSANPKSA-GSSEILLDLDDSVGAQQSMNNSVKRRK----IAKTTHFLALDKCL 377
Query: 289 PRRSYFEVINI-PILENNHPSVHDDGLYYDKRAIAINRVVEKYRIDQKTEFELMSPREIL 347
PRR + EV++I P+ EN+ HD GLY+D R+IA+N+VVE + + + ++P ++L
Sbjct: 378 PRRKFIEVLDIDPLTENS--IYHDSGLYHDARSIAVNKVVEDFVSTNFSVWSSINPHDLL 435
Query: 348 RDPRKLEKFIPLVAKELE-----EINQIDDNQFVIPKNFEVVAP--ADYDGELKYYPN 398
R I + ELE EI +I+ +P NF+ AP + D L+Y+ N
Sbjct: 436 HLDR-----IKGLINELEESISREIPRIEKLDLKVPSNFQKCAPDNSQKDVSLQYWTN 488
>YKL149C Chr11 complement(167617..168834) [1218 bp, 405 aa] RNA lariat
debranching enzyme, involved in intron turnover;
required for efficient Ty1 transposition
Length = 405
Score = 253 bits (646), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 154/396 (38%), Positives = 236/396 (59%), Gaps = 32/396 (8%)
Query: 1 MKTLKVAIEGCCHGDLNKIYKGIP-----SSTELLLICGDFQALRNTSDYQALSVPEKYR 55
M L++A++GCCHG LN+IYK + + +LL+I GDFQ++R+ D++++++P KY+
Sbjct: 1 MTKLRIAVQGCCHGQLNQIYKEVSRIHAKTPIDLLIILGDFQSIRDGQDFKSIAIPPKYQ 60
Query: 56 RLGDFQSYYTSKKKAPVLTIFIGGNHESSSYLQELKYGGWVAPNIYYLGEFGSVHYKGLS 115
RLGDF SYY ++ +APV TIFIGGNHES +L L +GG+VA NI+Y+G + +KG+
Sbjct: 61 RLGDFISYYNNEIEAPVPTIFIGGNHESMRHLMLLPHGGYVAKNIFYMGYSNVIWFKGIR 120
Query: 116 ICGWSGIYNPHTYMNKSFNVERLPFDS--NSIRSVYHQKLSNFLKMYL-QRDMDIVLSHD 172
I SGI+ + + + L ++ +IR++YH ++S+ +++ + +DI+LSHD
Sbjct: 121 IGSLSGIWKEWDFNKQRPDWNDLENNNWKANIRNLYHVRISDIAPLFMIKHRIDIMLSHD 180
Query: 173 WPVGIEKFGDKYRLLKQKPFFTQDIKKGQLGSPLNNVLLHHLKPRYWFSGHLHVKFKANV 232
WP G+ GD LLK KPFF QDIK+G+LGSP+ LL L+P++W S HLHV+F A++
Sbjct: 181 WPNGVVYHGDTKHLLKLKPFFEQDIKEGKLGSPVTWQLLRDLRPQWWLSAHLHVRFMASI 240
Query: 233 NH--------NISKPKQVKNANEILLDMESLDEASDGENQPQKKMKPNGHVVHDTQFLAL 284
H N S K KN NEI LD+ S ++ G Q++ + + +T+FLAL
Sbjct: 241 KHNKRSHEPPNKSTSKTKKNNNEIDLDLSSDEDERSGIMNCQEENEYDSK-YGETRFLAL 299
Query: 285 DKYGPRRSYFEVINIPILENNHPSVHDDG--LYYDKRAIAINRVVEKYRIDQKTEFELMS 342
DK PRR + E++ I + +H S D+ +++D IN +V I QK + L+S
Sbjct: 300 DKCLPRRRWLEILEIE-PDTSHASWKDENHRMFWDPE--FINNLV----ICQKNK-NLLS 351
Query: 343 PREILRDPRKLEKFIPLVAKELEEINQIDDNQFVIP 378
+ P +I L EE ID + IP
Sbjct: 352 NK-----PFNSVNWIELSQSNREEGRDIDWENYAIP 382
Database: Seq/AA.fsa
Posted date: Feb 8, 2013 12:45 PM
Number of letters in database: 40,655,052
Number of sequences in database: 85,676
Lambda K H
0.319 0.138 0.418
Gapped Lambda K H 0.267 0.0410 0.140
Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 85676 Number of Hits to DB: 39,156,959 Number of extensions: 1946850 Number of successful extensions: 5477 Number of sequences better than 10.0: 22 Number of HSP's gapped: 5602 Number of HSP's successfully gapped: 26 Length of query: 417 Length of database: 40,655,052 Length adjustment: 110 Effective length of query: 307 Effective length of database: 31,230,692 Effective search space: 9587822444 Effective search space used: 9587822444 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 66 (30.0 bits)